Microcephaly : Methods and Protocols
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Overview
Part I Cellular Analyses of Neural Progenitors
1. Dissociation of Cerebellar Granule Neuron Progenitors for Culture, FACS, Transcriptomics, and Molecular Biology
Jennifer Karin Ocasio
2. Maintaining Cerebellar Granule Neuron Progenitors in Cell Culture
Jennifer Karin Ocasio
3. Proliferation Analysis of Cerebellar Granule Neuron Progenitors for Microcephaly Research, Using Immunofluorescent Staining and Flow Cytometry
Jennifer Karin Ocasio
4. Conventional and Spectral Karyotyping of Murine Cerebellar Granule Neuron Progenitors
Gouri Nanjangud
Part II Analyses of Neural Progenitors In Situ
5. Processing of Neonatal Mouse Brains for Immunohistochemical Analysis, As Required for Including Spindle Orientation Analysis and Analysis of DNA Damage and Apoptosis
Gabriela De la Cruz, Nana Nikolaishvili-Feinberg, Scott E. Williams, and Timothy R. Gershon
6. Automated Immunofluorescence Staining for Analysis of DNA Damage and Apoptosis in Brain Sections
Gabriela De la Cruz, Nana Nikolaishvili-Feinberg, and Timothy R. Gershon
7. Automated Immunofluorescence Staining for Analysis of Mitotic Stages and Division Orientation in Brain Sections
Gabriela De la Cruz, Nana Nikolaishvili-Feinberg, and Scott E. Williams
8. scRNA-seq for Microcephaly Research 1]: Single-Cell Droplet Encapsulation, mRNA Capture, and cDNA Synthesis
Benjamin Babcock and Seth Weir
9. scRNA-seq for Microcephaly Research 2]: Preparation of Single-Cell cDNA Libraries
Benjamin Babcock and Seth Weir
10. scRNA-seq for Microcephaly Research 3]: Computational Analysis of scRNA-seq Data
Benjamin Babcock and Daniel Malawsky
11. scRNA-seq for Microcephaly Research 4]: Dirichlet Regression for Single Cell Population Differences
Daniel Malawsky and Timothy R. Gershon
Part IV MRI Analyses of the Mouse Brain
12. Mouse Brain MRI, Including In Vivo, Ex Vivo, and fcMRI for the Study of Microcephaly
Martin J. MacKinnon, Tzu-Wen W. Wang, and Yen-Yu I. Shih
13. Whole-Body Mouse Fluxomic Analysis to Detect Metabolic Disruptions Associated with Microcephaly, using 13C Isotopes
Andrey P. Tikunov
Part V Behavioral Phenotyping in Neonatal Mice
14. Neonatal Behavioral Screen for Mouse Models of Neurodevelopmental Disorders
Kathryn M. Harper, Viktoriya D. Nikolova, Monika E. Conrad, and Sheryl S. Moy
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Details
- ISBN-13: 9781071627518
- ISBN-10: 1071627511
- Publisher: Humana
- Publish Date: November 2022
- Dimensions: 10 x 7 x 0.5 inches
- Shipping Weight: 1.2 pounds
- Page Count: 176
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