{ "item_title" : "Transposable Elements", "item_author" : [" Miguel R. Branco", "Alexandre de Mendoza Soler "], "item_description" : "1. An overview of best practices for transposable element identification, classification and annotation in eukaryotic genomesFernando Rodriguez and Irina R. Arkhipova2. Assembly-free annotation and quantification of transposable elements with dnaPipeTEClément Goubert3. Best practice for the identification of horizontally transferred transposonsJames D Galbraith, Zhipeng Qu, Atma M Ivancevic, David L Adelson4. Genotyping of transposable elements insertions segregating in the human populations using short-read re-alignmentsXun Chen, Guillaume Bourque, and Clément Goubert5. A Pangenome approach to detect and genotype TE insertion polymorphismsCristian Groza, Guillaume Bourque, and Clément Goubert6. Experimental validation of transposable element insertions using the Polymerase Chain Reaction (PCR)Miriam Merenciano, Marta Coronado-Zamora, and Josefa González7. Quantification of LINE-1 RNA expression from bulk RNA-seq using L1EMWilson McKerrow8. Genome-wide profiling of L1 DNA methylation by bs-ATLAS-seqClaude Philippe and Gael Cristofari9. Nanopore epigenomic analysis of transposable element DNA modificationsNathan Smits and Geoffrey Faulkner10. Targeted resequencing and methylation analysis of L1 elements by nanopore sequencingArpita Sarkar, Sophie Lanciano, and Gael Cristofari11. Inferring protein-DNA binding profiles at interspersed repeats using HiChIP and PatChERDarren Taylor and Miguel R Branco12. Affinity-based Interactome Analysis of Endogenous LINE-1 MacromoleculesLuciano H. Di Stefano, Leila Saba, Mehrnoosh Oghbaie, Hua Jiang, Wilson McKerrow, Maria Benitez-Guijarro, Martin S. Taylor, and John LaCava13. LINE-1 retrotransposition assays in embryonic stem cellsMarta Garcia-Canadas, Francisco Sanchez-Luque, Laura Sanchez, Johana Rojas, and Jose Garcia Perez14. Detecting somatic transposable element insertions in Drosophila tissuesKatarzyna Siudeja15. Precise and scarless insertion of transposable elements by Cas9-mediated genome engineeringVivien M Weber, Aurelien J Doucet, and Gael Cristofari16. Epigenetic editing of transposable and repetitive elementsJoanna M Jachowicz17. Using CRISPR to investigate the regulatory activity of transposable elementsDavid M Simpson, Conor R Kelly, and Edward B Chuong", "item_img_path" : "https://covers2.booksamillion.com/covers/bam/1/07/162/882/1071628828_b.jpg", "price_data" : { "retail_price" : "249.99", "online_price" : "249.99", "our_price" : "249.99", "club_price" : "249.99", "savings_pct" : "0", "savings_amt" : "0.00", "club_savings_pct" : "0", "club_savings_amt" : "0.00", "discount_pct" : "10", "store_price" : "" } }

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