Overview
Part I: OverView 1. A Brief Introduction to Tiling Microarrays: Principles, Concepts, and Applications Christophe Lemetre and Zhengdong D. Zhang Part II: Transcriptional Regulation and Expression 2. Design of Tiling Arrays and their Application to Bacterial Transcriptome Analysis Takeshi Akama, Kazuaki Nakamura, Akito Tanoue, and Koichi Suzuki 3. Transcript Profiling in Arabidopsis with Genome Tiling Microarrays Diana Coman, Wilhelm Gruissem, and Lars Hennig 4. Genome-wide Analysis of Transcription Factor Binding Sites in Skeletal Muscle Cells using ChIP-seq Chung-Il An and Nobuko Hagiwara 5. Analysis of Allele-Specific Gene Expression Using a Target-Oriented Tiling Microarray Assay Huiyong Zhang, Xing-Wang Deng, and Lei Li Part III: Genetics and Epigenetics Regulation 6. Detection of Epigenetic Alterations Using Tiling Arrays Hoi-Hung Cheung and Owen M Rennert 7. Investigating Gene Promoter Methylation in a Mouse Model of Status Epilepticus Suzanne F. C. Miller-Delaney, Sudipto Das, Raymond L. Stallings, and David C. Henshall Part IV: Data Analysis 8. Integrative Analysis of ChIP-chip and ChIP-seq Dataset Lihua Julie Zhu 9. HAT: A Novel Statistical Approach to Discover Functional Regions in the Genome Erdogan Taskesen, Bas Wouters, and Ruud Delwel 10. Inference of Alternative Splicing from Tiling Array Data Johannes Eichner 11. Analysis of in vivo Occupancy of Aebp1, a Transcription Factor, using High Resolution Tiling Array Swati Sinha, Sainitin Donakonda, and Satyanarayana MR Rao 12. Application of the Simple and Efficient MPeak Modeling in Binding Peak Identification in CHIP-CHIP Studies Ming Zheng, Yunmin Li, and Yun-Fai Chris Lau 13. Evaluation of MeDIP-chip in the Context of Whole Genome Bisulphite Sequencing (WGBS-seq) in Arabidopsis Ren Wardenaar, Haiyin Liu, Vincent Colot, Maria Colom -Tatch , Frank Johannes 14. Mapping Genomic Features of Tiling Microarray Data by TileMapper Hoi-Hung Cheung, Janek Claus, Sumeeta Singh, Chandan Sastry, Owen M Rennert, Wai-Yee Chan, Tin-Lap Lee
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Details
- ISBN-13: 9781627036061
- ISBN-10: 1627036067
- Publisher: Humana
- Publish Date: August 2013
- Dimensions: 10 x 7.1 x 0.8 inches
- Shipping Weight: 1.35 pounds
- Page Count: 236
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